Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated protein gldl | SAMN04487898_117119 | Not Available | Negative | 5326174 - 5326977 | 28675.0 |
| gliding motility-associated lipoprotein gldk | SAMN04487898_117120 | Not Available | Negative | 5327028 - 5328395 | 50941.8 |
| uroporphyrinogen-iii synthase | SAMN04487898_117121 | Not Available | Negative | 5328564 - 5329334 | 29442.3 |
| protein of unknown function | SAMN04487898_117122 | Not Available | Negative | 5329352 - 5330344 | 37863.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_117123 | Not Available | Negative | 5330370 - 5330819 | 16975.6 |
| hypothetical protein | SAMN04487898_117124 | Not Available | Positive | 5331231 - 5331902 | 25095.2 |
| hypothetical protein | SAMN04487898_117125 | Not Available | Positive | 5331904 - 5332542 | 23510.2 |
| dna topoisomerase-1 | SAMN04487898_117126 | Not Available | Negative | 5332615 - 5333655 | 39458.9 |
| stress responsive a/b barrel domain | SAMN04487898_117127 | Not Available | Positive | 5333778 - 5334098 | 12464.8 |
| hypothetical protein | SAMN04487898_117128 | Not Available | Positive | 5334108 - 5334635 | 18997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

