Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | SAMN04487898_117109 | Not Available | Positive | 5308226 - 5310040 | 69739.7 |
| hypothetical protein | SAMN04487898_117110 | Not Available | Negative | 5310207 - 5312108 | 71508.6 |
| lysophospholipase l1 | SAMN04487898_117111 | Not Available | Negative | 5312168 - 5313859 | 63668.2 |
| rhamnogalacturonyl hydrolase yesr | SAMN04487898_117112 | Not Available | Negative | 5313925 - 5316333 | 91597.2 |
| starch-binding associating with outer membrane | SAMN04487898_117113 | Not Available | Negative | 5316374 - 5317810 | 52871.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_117114 | Not Available | Negative | 5317829 - 5321329 | 126606.0 |
| fecr family protein | SAMN04487898_117115 | Not Available | Negative | 5321549 - 5322763 | 45349.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_117116 | Not Available | Negative | 5322841 - 5323449 | 23879.6 |
| gliding motility associated protien gldn | SAMN04487898_117117 | Not Available | Negative | 5323629 - 5324576 | 35854.1 |
| gliding motility-associated protein gldm | SAMN04487898_117118 | Not Available | Negative | 5324585 - 5326126 | 55171.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

