Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type h+-transporting atpase subunit gamma | SAMN04487898_11799 | Not Available | Negative | 5297309 - 5298193 | 32291.0 |
| f-type h+-transporting atpase subunit alpha | SAMN04487898_117100 | Not Available | Negative | 5298218 - 5299792 | 56798.6 |
| f-type h+-transporting atpase subunit delta | SAMN04487898_117101 | Not Available | Negative | 5299850 - 5300398 | 19821.1 |
| f-type h+-transporting atpase subunit b | SAMN04487898_117102 | Not Available | Negative | 5300433 - 5300927 | 18582.7 |
| f-type h+-transporting atpase subunit c | SAMN04487898_117103 | Not Available | Negative | 5301003 - 5301215 | 6626.33 |
| f-type h+-transporting atpase subunit a | SAMN04487898_117104 | Not Available | Negative | 5301254 - 5302381 | 42388.3 |
| hypothetical protein | SAMN04487898_117105 | Not Available | Negative | 5302399 - 5302785 | 14586.5 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN04487898_117106 | Not Available | Negative | 5302832 - 5303053 | 8235.16 |
| tetratricopeptide repeat-containing protein | SAMN04487898_117107 | Not Available | Positive | 5303158 - 5305980 | 106715.0 |
| penicillin-binding protein 1a | SAMN04487898_117108 | Not Available | Positive | 5305982 - 5308201 | 82882.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

