Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_11789 | Not Available | Negative | 5286836 - 5287951 | 43174.6 |
| rnase hii | SAMN04487898_11790 | Not Available | Negative | 5288057 - 5288668 | 22866.6 |
| peptide/nickel transport system permease protein | SAMN04487898_11791 | Not Available | Negative | 5288701 - 5289792 | 40201.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04487898_11792 | Not Available | Negative | 5289792 - 5290871 | 40475.5 |
| hypothetical protein | SAMN04487898_11793 | Not Available | Negative | 5290906 - 5291907 | 38724.9 |
| holliday junction endonuclease ruvc | SAMN04487898_11794 | Not Available | Positive | 5291927 - 5292490 | 20728.6 |
| protein of unknown function | SAMN04487898_11795 | Not Available | Negative | 5292483 - 5293337 | 32507.4 |
| transposase, is4 family | SAMN04487898_11796 | Not Available | Positive | 5293578 - 5295113 | 59266.9 |
| hypothetical protein | SAMN04487898_11797 | Not Available | Negative | 5295272 - 5295487 | 7609.56 |
| conserved hypothetical protein | SAMN04487898_11798 | Not Available | Positive | 5295639 - 5297249 | 59988.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

