Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | SAMN04487898_11779 | Not Available | Negative | 5276267 - 5277538 | 47362.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04487898_11780 | Not Available | Positive | 5277656 - 5278366 | 26599.1 |
| short c-terminal domain-containing protein | SAMN04487898_11781 | Not Available | Positive | 5278409 - 5279056 | 24591.4 |
| apolipoprotein n-acyltransferase | SAMN04487898_11782 | Not Available | Positive | 5279067 - 5280686 | 60377.3 |
| nad+ synthase (glutamine-hydrolysing) | SAMN04487898_11783 | Not Available | Negative | 5280683 - 5282323 | 60711.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_11784 | Not Available | Negative | 5282417 - 5283085 | 24405.2 |
| gliding motility-associated lipoprotein gldb | SAMN04487898_11785 | Not Available | Positive | 5283113 - 5284171 | 41337.8 |
| nte family protein | SAMN04487898_11786 | Not Available | Positive | 5284191 - 5284961 | 28076.6 |
| 2-phosphosulfolactate phosphatase | SAMN04487898_11787 | Not Available | Negative | 5284950 - 5285672 | 26356.6 |
| aminomethyltransferase | SAMN04487898_11788 | Not Available | Negative | 5285715 - 5286794 | 39492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

