Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inhibitor of kina | SAMN04487898_11769 | Not Available | Negative | 5262352 - 5263059 | 25715.7 |
| protein of unknown function | SAMN04487898_11770 | Not Available | Negative | 5263161 - 5264471 | 46125.8 |
| isoleucyl-trna synthetase | SAMN04487898_11771 | Not Available | Positive | 5264692 - 5268084 | 129157.0 |
| transcriptional regulator, trar/dksa family | SAMN04487898_11772 | Not Available | Positive | 5268092 - 5268472 | 14452.2 |
| signal peptidase ii | SAMN04487898_11773 | Not Available | Positive | 5268472 - 5269074 | 22738.2 |
| hypothetical protein | SAMN04487898_11774 | Not Available | Positive | 5269159 - 5269872 | 26516.3 |
| hypothetical protein | SAMN04487898_11775 | Not Available | Positive | 5270004 - 5270318 | 11638.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04487898_11776 | Not Available | Negative | 5270409 - 5273588 | 114668.0 |
| membrane fusion protein, multidrug efflux system | SAMN04487898_11777 | Not Available | Negative | 5273604 - 5274719 | 39495.5 |
| outer membrane protein tolc | SAMN04487898_11778 | Not Available | Negative | 5274729 - 5276078 | 51583.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

