Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11759 | Not Available | Positive | 5250991 - 5251977 | 36961.9 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04487898_11760 | Not Available | Positive | 5251985 - 5252899 | 32584.4 |
| 3-dehydroquinate synthase | SAMN04487898_11761 | Not Available | Positive | 5252911 - 5254089 | 43510.8 |
| hypothetical protein | SAMN04487898_11762 | Not Available | Positive | 5254091 - 5255299 | 45840.5 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN04487898_11763 | Not Available | Positive | 5255316 - 5256668 | 50826.9 |
| phospholipase c | SAMN04487898_11764 | Not Available | Positive | 5256767 - 5259151 | 89053.1 |
| hypothetical protein | SAMN04487898_11765 | Not Available | Negative | 5259132 - 5259398 | 9905.41 |
| mn2+ and fe2+ transporters of the nramp family | SAMN04487898_11766 | Not Available | Negative | 5259450 - 5260628 | 41095.1 |
| upf0271 protein | SAMN04487898_11767 | Not Available | Negative | 5260633 - 5261400 | 27396.5 |
| antagonist of kipi | SAMN04487898_11768 | Not Available | Negative | 5261406 - 5262362 | 34714.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

