Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN04487898_11739 | Not Available | Positive | 5220905 - 5221375 | 16923.4 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04487898_11740 | Not Available | Positive | 5221397 - 5222737 | 49560.2 |
| sec-independent protein translocase protein tatc | SAMN04487898_11741 | Not Available | Positive | 5222820 - 5223713 | 33775.1 |
| ribose 5-phosphate isomerase b | SAMN04487898_11742 | Not Available | Positive | 5223750 - 5224190 | 16065.0 |
| peptidase family m28 | SAMN04487898_11743 | Not Available | Positive | 5224202 - 5225794 | 58424.7 |
| hypothetical protein | SAMN04487898_11744 | Not Available | Negative | 5225947 - 5227032 | 40204.4 |
| fasciclin domain-containing protein | SAMN04487898_11745 | Not Available | Negative | 5227035 - 5227736 | 26223.2 |
| starch-binding associating with outer membrane | SAMN04487898_11746 | Not Available | Negative | 5227814 - 5229388 | 58578.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11747 | Not Available | Negative | 5229398 - 5232529 | 115894.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11748 | Not Available | Positive | 5232943 - 5233491 | 20899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

