Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04487898_11729 | Not Available | Positive | 5213647 - 5213973 | 12254.7 |
| histidine triad (hit) family protein | SAMN04487898_11730 | Not Available | Negative | 5214037 - 5214429 | 14371.8 |
| transcription elongation factor grea | SAMN04487898_11731 | Not Available | Negative | 5214440 - 5214913 | 17093.5 |
| d-3-phosphoglycerate dehydrogenase | SAMN04487898_11732 | Not Available | Negative | 5215072 - 5215995 | 34195.3 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN04487898_11733 | Not Available | Negative | 5216026 - 5216808 | 29681.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04487898_11734 | Not Available | Positive | 5216908 - 5217987 | 39012.9 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN04487898_11735 | Not Available | Positive | 5218023 - 5218580 | 21329.6 |
| large subunit ribosomal protein l32 | SAMN04487898_11736 | Not Available | Positive | 5218602 - 5218793 | 7136.55 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04487898_11737 | Not Available | Positive | 5218914 - 5219831 | 32751.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04487898_11738 | Not Available | Positive | 5219843 - 5220832 | 35802.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

