Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_1178 | Not Available | Positive | 5193513 - 5193866 | 13305.0 |
| Trna-glu | Not Available | Not Available | Positive | 5193944 - 5194018 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5194061 - 5194136 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 5194214 - 5194285 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5194325 - 5194400 | Not Available |
| gtp-binding protein era | SAMN04487898_11713 | Not Available | Positive | 5194512 - 5195399 | 33787.9 |
| gtp-binding protein | SAMN04487898_11714 | Not Available | Positive | 5195484 - 5196785 | 49089.5 |
| carboxyl-terminal processing protease | SAMN04487898_11715 | Not Available | Negative | 5196797 - 5198377 | 58868.3 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04487898_11716 | Not Available | Positive | 5198642 - 5199460 | 29324.3 |
| hypothetical protein | SAMN04487898_11717 | Not Available | Positive | 5199475 - 5200047 | 22926.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

