Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_116177 | Not Available | Negative | 5182884 - 5183531 | 24500.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_116178 | Not Available | Negative | 5183566 - 5184126 | 21953.2 |
| transketolase, c-terminal domain | SAMN04487898_116179 | Not Available | Negative | 5184145 - 5184526 | 13596.3 |
| transposase domain | SAMN04487898_1171 | Not Available | Negative | 5184527 - 5184779 | 9540.65 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_1172 | Not Available | Negative | 5184861 - 5185928 | 39960.3 |
| susd family protein | SAMN04487898_1173 | Not Available | Negative | 5185932 - 5187368 | 53181.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_1174 | Not Available | Negative | 5187429 - 5190452 | 110037.0 |
| secretin and tonb n terminus short domain-containing protein | SAMN04487898_1175 | Not Available | Negative | 5190466 - 5190984 | 19174.8 |
| fecr family protein | SAMN04487898_1176 | Not Available | Negative | 5191216 - 5192442 | 45296.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_1177 | Not Available | Negative | 5192541 - 5193140 | 22984.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

