Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_116157 | Not Available | Positive | 5162736 - 5163050 | 11635.9 |
| trna dimethylallyltransferase | SAMN04487898_116158 | Not Available | Negative | 5163047 - 5163964 | 34648.5 |
| pria4b orf-3-like protein | SAMN04487898_116159 | Not Available | Negative | 5163964 - 5164614 | 25043.4 |
| hdig domain-containing protein | SAMN04487898_116160 | Not Available | Negative | 5164672 - 5166078 | 53398.8 |
| l-threonylcarbamoyladenylate synthase | SAMN04487898_116161 | Not Available | Negative | 5166105 - 5166671 | 20921.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_116162 | Not Available | Negative | 5166696 - 5167823 | 42296.6 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04487898_116163 | Not Available | Negative | 5167828 - 5168646 | 29630.3 |
| heat shock protein hsp15 | SAMN04487898_116164 | Not Available | Positive | 5168695 - 5169123 | 16301.0 |
| ecsc protein family protein | SAMN04487898_116165 | Not Available | Negative | 5169120 - 5169836 | 27317.6 |
| trna(arg) a34 adenosine deaminase tada | SAMN04487898_116166 | Not Available | Negative | 5169849 - 5170322 | 17802.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

