Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | SAMN04487898_116147 | Not Available | Positive | 5149963 - 5151150 | 43042.0 |
| Trna-trp | Not Available | Not Available | Positive | 5151261 - 5151334 | Not Available |
| preprotein translocase subunit sece | SAMN04487898_116149 | Not Available | Positive | 5151345 - 5151542 | 7316.95 |
| transcription antitermination protein nusg | SAMN04487898_116150 | Not Available | Positive | 5151554 - 5152096 | 20655.2 |
| large subunit ribosomal protein l11 | SAMN04487898_116151 | Not Available | Positive | 5152185 - 5152628 | 15552.9 |
| large subunit ribosomal protein l1 | SAMN04487898_116152 | Not Available | Positive | 5152652 - 5153350 | 24505.9 |
| large subunit ribosomal protein l10 | SAMN04487898_116153 | Not Available | Positive | 5153353 - 5153874 | 18723.7 |
| large subunit ribosomal protein l7/l12 | SAMN04487898_116154 | Not Available | Positive | 5153937 - 5154311 | 12784.4 |
| dna-directed rna polymerase subunit beta | SAMN04487898_116155 | Not Available | Positive | 5154465 - 5158268 | 142352.0 |
| dna-directed rna polymerase subunit beta' | SAMN04487898_116156 | Not Available | Positive | 5158356 - 5162642 | 159703.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

