Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN04487898_116137 | Not Available | Positive | 5143740 - 5144912 | 42440.0 |
| hypothetical protein | SAMN04487898_116138 | Not Available | Negative | 5144990 - 5145361 | 14100.2 |
| small subunit ribosomal protein s21 | SAMN04487898_116139 | Not Available | Positive | 5145514 - 5145708 | 7549.43 |
| signal transduction histidine kinase | SAMN04487898_116140 | Not Available | Negative | 5145764 - 5147560 | 68490.4 |
| integrase/recombinase xerc | SAMN04487898_116141 | Not Available | Positive | 5147934 - 5148818 | 33995.2 |
| putative sigma-54 modulation protein | SAMN04487898_116142 | Not Available | Positive | 5148833 - 5149180 | 13257.0 |
| Trna-thr | Not Available | Not Available | Positive | 5149388 - 5149460 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5149500 - 5149585 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5149618 - 5149693 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5149774 - 5149848 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

