Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_116127 | Not Available | Negative | 5129760 - 5130962 | 47152.4 |
| nlpc/p60 family protein | SAMN04487898_116128 | Not Available | Positive | 5131250 - 5132491 | 45795.6 |
| l-alanine-dl-glutamate epimerase | SAMN04487898_116129 | Not Available | Positive | 5132481 - 5133620 | 42298.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_116130 | Not Available | Positive | 5133650 - 5136835 | 116167.0 |
| starch-binding associating with outer membrane | SAMN04487898_116131 | Not Available | Positive | 5136846 - 5138267 | 53065.8 |
| predicted membrane protein | SAMN04487898_116132 | Not Available | Positive | 5138435 - 5139067 | 24254.9 |
| yarhg domain-containing protein | SAMN04487898_116133 | Not Available | Positive | 5139055 - 5139936 | 33565.7 |
| putative hemolysin | SAMN04487898_116134 | Not Available | Negative | 5140090 - 5141841 | 66826.7 |
| competence protein comea helix-hairpin-helix repeat region | SAMN04487898_116135 | Not Available | Positive | 5142087 - 5142992 | 35113.0 |
| adenine phosphoribosyltransferase | SAMN04487898_116136 | Not Available | Positive | 5142995 - 5143522 | 19084.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

