Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryltransferase | SAMN04487898_116117 | Not Available | Positive | 5117337 - 5118077 | 28535.9 |
| hypothetical protein | SAMN04487898_116118 | Not Available | Positive | 5118074 - 5119465 | 53228.2 |
| hypothetical protein | SAMN04487898_116119 | Not Available | Positive | 5119480 - 5119683 | 6861.11 |
| phenylalanyl-trna synthetase beta subunit | SAMN04487898_116120 | Not Available | Positive | 5119734 - 5122133 | 88345.0 |
| hypothetical protein | SAMN04487898_116121 | Not Available | Positive | 5122153 - 5122443 | 10776.2 |
| cell division protein zapa | SAMN04487898_116122 | Not Available | Positive | 5122475 - 5122765 | 11044.2 |
| ribonucrease y | SAMN04487898_116123 | Not Available | Positive | 5123123 - 5124685 | 58467.9 |
| uncharacterized membrane protein ygl010w | SAMN04487898_116124 | Not Available | Positive | 5124770 - 5125294 | 20184.3 |
| tonb-dependent receptor | SAMN04487898_116125 | Not Available | Positive | 5125408 - 5128209 | 103285.0 |
| hypothetical protein | SAMN04487898_116126 | Not Available | Positive | 5128308 - 5129693 | 48304.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

