Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN04487898_11697 | Not Available | Positive | 5096520 - 5098931 | 89310.9 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04487898_11698 | Not Available | Negative | 5099105 - 5100100 | 36092.4 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04487898_11699 | Not Available | Negative | 5100107 - 5100877 | 28847.2 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04487898_116100 | Not Available | Negative | 5100886 - 5101695 | 29025.6 |
| hypothetical protein | SAMN04487898_116101 | Not Available | Positive | 5102011 - 5102376 | 14030.1 |
| ferritin | SAMN04487898_116102 | Not Available | Positive | 5102480 - 5103007 | 20429.0 |
| lipid ii:glycine glycyltransferase (peptidoglycan interpeptide bridge formation enzyme) | SAMN04487898_116103 | Not Available | Negative | 5103247 - 5104368 | 43335.2 |
| thymidine kinase | SAMN04487898_116104 | Not Available | Negative | 5104443 - 5104958 | 19004.9 |
| hypothetical protein | SAMN04487898_116105 | Not Available | Positive | 5105127 - 5106167 | 39680.8 |
| rod shape determining protein roda | SAMN04487898_116106 | Not Available | Negative | 5106160 - 5107428 | 47241.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

