Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chondroitin ac lyase | SAMN04487898_11687 | Not Available | Positive | 5081364 - 5083472 | 78431.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11688 | Not Available | Positive | 5083635 - 5086811 | 116351.0 |
| starch-binding associating with outer membrane | SAMN04487898_11689 | Not Available | Positive | 5086830 - 5088833 | 71744.6 |
| protein of unknown function | SAMN04487898_11690 | Not Available | Positive | 5088870 - 5089871 | 35483.1 |
| alpha-l-fucosidase | SAMN04487898_11691 | Not Available | Positive | 5089893 - 5091284 | 52092.6 |
| hypothetical protein | SAMN04487898_11692 | Not Available | Positive | 5091284 - 5093560 | 85463.9 |
| glycosyl hydrolase family 88 | SAMN04487898_11693 | Not Available | Positive | 5093593 - 5094858 | 48231.6 |
| hypothetical protein | SAMN04487898_11694 | Not Available | Positive | 5095214 - 5095411 | 7392.8 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN04487898_11695 | Not Available | Positive | 5095393 - 5095707 | 12027.7 |
| mj0570-related uncharacterized domain-containing protein | SAMN04487898_11696 | Not Available | Positive | 5095734 - 5096420 | 25763.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

