Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11677 | Not Available | Positive | 5061003 - 5061128 | 4621.78 |
| hypothetical protein | SAMN04487898_11678 | Not Available | Positive | 5061140 - 5063647 | 90803.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11679 | Not Available | Negative | 5063754 - 5064374 | 24465.8 |
| fecr family protein | SAMN04487898_11680 | Not Available | Positive | 5064507 - 5065673 | 43457.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11681 | Not Available | Positive | 5065831 - 5069520 | 136302.0 |
| susd family protein | SAMN04487898_11682 | Not Available | Positive | 5069532 - 5071004 | 54647.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_11683 | Not Available | Positive | 5071045 - 5072457 | 53175.3 |
| signal transduction histidine kinase | SAMN04487898_11684 | Not Available | Positive | 5072648 - 5076775 | 156139.0 |
| chondroitin-sulfate-abc endolyase/exolyase | SAMN04487898_11685 | Not Available | Positive | 5076869 - 5079937 | 115552.0 |
| arylsulfatase a | SAMN04487898_11686 | Not Available | Positive | 5079946 - 5081334 | 51522.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

