Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ph domain-containing protein | SAMN04487898_11667 | Not Available | Negative | 5054355 - 5054645 | 10929.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN04487898_11668 | Not Available | Positive | 5054735 - 5055457 | 27872.3 |
| hypothetical protein | SAMN04487898_11669 | Not Available | Negative | 5055484 - 5055963 | 18305.6 |
| hypothetical protein | SAMN04487898_11670 | Not Available | Positive | 5056015 - 5056497 | 18701.5 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04487898_11671 | Not Available | Negative | 5056463 - 5057260 | 29592.3 |
| cysteine-rich domain-containing protein | SAMN04487898_11672 | Not Available | Negative | 5057250 - 5058050 | 29429.5 |
| 4fe-4s dicluster domain-containing protein | SAMN04487898_11673 | Not Available | Negative | 5058105 - 5059400 | 48505.4 |
| Trna-phe | Not Available | Not Available | Positive | 5059602 - 5059674 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 5059881 - 5059953 | Not Available |
| rna-directed dna polymerase | SAMN04487898_11676 | Not Available | Positive | 5060255 - 5060584 | 12489.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

