Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN04487898_11657 | Not Available | Negative | 5044376 - 5046436 | 76881.1 |
| isocitrate dehydrogenase | SAMN04487898_11658 | Not Available | Positive | 5046641 - 5048860 | 79833.3 |
| hypothetical protein | SAMN04487898_11659 | Not Available | Positive | 5048989 - 5049414 | 15891.8 |
| dna polymerase-3 subunit gamma/tau | SAMN04487898_11660 | Not Available | Negative | 5049416 - 5051269 | 68846.7 |
| arac-type dna-binding protein | SAMN04487898_11661 | Not Available | Negative | 5051375 - 5052256 | 33605.1 |
| hypothetical protein | SAMN04487898_11662 | Not Available | Positive | 5052421 - 5053014 | 22226.6 |
| hypothetical protein | SAMN04487898_11663 | Not Available | Negative | 5053015 - 5053173 | 6017.53 |
| small subunit ribosomal protein s6 | SAMN04487898_11664 | Not Available | Positive | 5053210 - 5053572 | 13741.6 |
| small subunit ribosomal protein s18 | SAMN04487898_11665 | Not Available | Positive | 5053572 - 5053835 | 10212.6 |
| large subunit ribosomal protein l9 | SAMN04487898_11666 | Not Available | Positive | 5053846 - 5054289 | 16176.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

