Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yeih | SAMN04487898_11637 | Not Available | Positive | 5026992 - 5027603 | 22177.1 |
| cell division protein ftsb | SAMN04487898_11638 | Not Available | Negative | 5027600 - 5027935 | 13605.4 |
| enolase | SAMN04487898_11639 | Not Available | Negative | 5028013 - 5029308 | 46237.9 |
| aquaporin z | SAMN04487898_11640 | Not Available | Negative | 5029619 - 5030311 | 23319.8 |
| abc-2 type transport system permease protein | SAMN04487898_11641 | Not Available | Negative | 5030403 - 5031494 | 39676.2 |
| abc-2 type transport system atp-binding protein | SAMN04487898_11642 | Not Available | Negative | 5031502 - 5032272 | 28697.6 |
| carbamoyl-phosphate synthase small subunit | SAMN04487898_11643 | Not Available | Negative | 5032272 - 5033384 | 40985.9 |
| hypothetical protein | SAMN04487898_11644 | Not Available | Positive | 5033405 - 5033557 | 5767.37 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN04487898_11645 | Not Available | Positive | 5033785 - 5034600 | 29511.6 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04487898_11646 | Not Available | Positive | 5034600 - 5035286 | 25852.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

