Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine38-40 synthase | SAMN04487898_11617 | Not Available | Positive | 5006109 - 5006888 | 29542.1 |
| atp-binding cassette, subfamily b | SAMN04487898_11618 | Not Available | Positive | 5006891 - 5008660 | 66614.0 |
| arsenite transporter, acr3 family | SAMN04487898_11619 | Not Available | Negative | 5008804 - 5009862 | 39011.0 |
| arsenate reductase | SAMN04487898_11620 | Not Available | Negative | 5009874 - 5010293 | 15531.3 |
| hypothetical protein | SAMN04487898_11621 | Not Available | Negative | 5010315 - 5010884 | 20808.9 |
| dna-binding transcriptional regulator, arsr family | SAMN04487898_11622 | Not Available | Negative | 5010923 - 5011252 | 11719.4 |
| numod4 motif-containing protein | SAMN04487898_11623 | Not Available | Negative | 5011429 - 5012652 | 45921.1 |
| polar amino acid transport system substrate-binding protein | SAMN04487898_11624 | Not Available | Positive | 5013086 - 5013772 | 25783.0 |
| hypothetical protein | SAMN04487898_11625 | Not Available | Negative | 5013769 - 5014200 | 16525.0 |
| uncharacterized membrane protein | SAMN04487898_11626 | Not Available | Positive | 5014287 - 5014874 | 21823.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

