Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | SAMN04487898_115169 | Not Available | Positive | 4986268 - 4987176 | 33395.4 |
| hypothetical protein | SAMN04487898_115170 | Not Available | Positive | 4987606 - 4988712 | 42795.6 |
| hypothetical protein | SAMN04487898_115171 | Not Available | Positive | 4988717 - 4988851 | 5161.24 |
| hypothetical protein | SAMN04487898_115172 | Not Available | Negative | 4988858 - 4989097 | 9296.34 |
| hypothetical protein | SAMN04487898_1161 | Not Available | Negative | 4989098 - 4989400 | 11673.9 |
| protein of unknown function | SAMN04487898_1162 | Not Available | Negative | 4989646 - 4990098 | 17498.7 |
| hypothetical protein | SAMN04487898_1163 | Not Available | Negative | 4990463 - 4990834 | 14412.2 |
| hypothetical protein | SAMN04487898_1164 | Not Available | Negative | 4990971 - 4991261 | 11330.4 |
| hepn domain-containing protein | SAMN04487898_1165 | Not Available | Negative | 4991303 - 4992196 | 34329.1 |
| hypothetical protein | SAMN04487898_1166 | Not Available | Positive | 4992227 - 4992472 | 9045.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

