Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_115159 | Not Available | Positive | 4974758 - 4975003 | 8582.15 |
| hypothetical protein | SAMN04487898_115160 | Not Available | Positive | 4975450 - 4975695 | 8792.51 |
| hypothetical protein | SAMN04487898_115161 | Not Available | Positive | 4976144 - 4976389 | 8770.31 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_115162 | Not Available | Negative | 4976751 - 4978097 | 51487.0 |
| susd family protein | SAMN04487898_115163 | Not Available | Negative | 4978172 - 4979596 | 53194.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_115164 | Not Available | Negative | 4979608 - 4982937 | 122279.0 |
| fecr family protein | SAMN04487898_115165 | Not Available | Negative | 4983139 - 4984266 | 42191.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_115166 | Not Available | Negative | 4984370 - 4984927 | 21829.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_115167 | Not Available | Negative | 4985096 - 4985668 | 22364.1 |
| hypothetical protein | SAMN04487898_115168 | Not Available | Negative | 4985661 - 4985852 | 7157.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

