Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04487898_115149 | Not Available | Negative | 4967953 - 4968513 | 21824.7 |
| fecr family protein | SAMN04487898_115150 | Not Available | Negative | 4968515 - 4969639 | 41403.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_115151 | Not Available | Negative | 4969722 - 4970303 | 22917.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_115152 | Not Available | Positive | 4970608 - 4971231 | 24615.3 |
| hypothetical protein | SAMN04487898_115153 | Not Available | Positive | 4971260 - 4971904 | 25126.2 |
| hypothetical protein | SAMN04487898_115154 | Not Available | Positive | 4972034 - 4972393 | 13909.4 |
| hypothetical protein | SAMN04487898_115155 | Not Available | Negative | 4972234 - 4972548 | 11814.6 |
| methylamine utilisation protein maue | SAMN04487898_115156 | Not Available | Positive | 4972743 - 4973234 | 18538.6 |
| hypothetical protein | SAMN04487898_115157 | Not Available | Positive | 4973329 - 4973568 | 8342.88 |
| hypothetical protein | SAMN04487898_115158 | Not Available | Positive | 4973621 - 4974658 | 39777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

