Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_115119 | Not Available | Negative | 4939116 - 4939391 | 10771.9 |
| hypothetical protein | SAMN04487898_115120 | Not Available | Negative | 4939905 - 4940486 | 23021.6 |
| hypothetical protein | SAMN04487898_115121 | Not Available | Negative | 4940534 - 4940992 | 17241.7 |
| sodium:alanine symporter family protein | SAMN04487898_115122 | Not Available | Negative | 4941463 - 4941954 | 18096.1 |
| glycosyl hydrolases family 16 | SAMN04487898_115123 | Not Available | Negative | 4942091 - 4943500 | 51864.1 |
| hypothetical protein | SAMN04487898_115124 | Not Available | Negative | 4943707 - 4943859 | 5434.74 |
| tonb family c-terminal domain-containing protein | SAMN04487898_115125 | Not Available | Negative | 4944199 - 4944975 | 29135.3 |
| hypothetical protein | SAMN04487898_115126 | Not Available | Positive | 4945242 - 4945583 | 12759.8 |
| arac-type dna-binding protein | SAMN04487898_115127 | Not Available | Positive | 4946180 - 4947331 | 43649.9 |
| hypothetical protein | SAMN04487898_115128 | Not Available | Positive | 4947462 - 4947668 | 7554.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

