Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_115109 | Not Available | Positive | 4922383 - 4922979 | 23001.0 |
| fecr family protein | SAMN04487898_115110 | Not Available | Positive | 4923071 - 4924108 | 39146.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_115111 | Not Available | Positive | 4924294 - 4927800 | 127525.0 |
| starch-binding associating with outer membrane | SAMN04487898_115112 | Not Available | Positive | 4927811 - 4929406 | 60151.4 |
| peroxiredoxin | SAMN04487898_115113 | Not Available | Positive | 4929490 - 4930623 | 41572.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_115114 | Not Available | Positive | 4930929 - 4931531 | 23898.2 |
| fecr family protein | SAMN04487898_115115 | Not Available | Positive | 4931601 - 4932734 | 42791.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_115116 | Not Available | Positive | 4932945 - 4936358 | 124836.0 |
| susd family protein | SAMN04487898_115117 | Not Available | Positive | 4936370 - 4937776 | 52183.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_115118 | Not Available | Positive | 4937835 - 4939010 | 44032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

