Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN04487898_11599 | Not Available | Negative | 4907774 - 4908565 | 30881.8 |
| hypothetical protein | SAMN04487898_115100 | Not Available | Positive | 4908752 - 4909600 | 31260.4 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_115101 | Not Available | Negative | 4909626 - 4910621 | 38483.8 |
| prolyl oligopeptidase family protein | SAMN04487898_115102 | Not Available | Positive | 4911056 - 4913464 | 89702.3 |
| non-ribosomal peptide synthetase terminal domain of unknown function | SAMN04487898_115103 | Not Available | Positive | 4913497 - 4917474 | 147701.0 |
| lipoprotein-releasing system permease protein | SAMN04487898_115104 | Not Available | Negative | 4917480 - 4918589 | 42259.6 |
| protein of unknown function | SAMN04487898_115105 | Not Available | Positive | 4919040 - 4919762 | 28203.9 |
| rifampin adp-ribosylating transferase | SAMN04487898_115106 | Not Available | Positive | 4919953 - 4920696 | 27768.7 |
| hypothetical protein | SAMN04487898_115107 | Not Available | Positive | 4920764 - 4920955 | 7150.56 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04487898_115108 | Not Available | Positive | 4921078 - 4922304 | 45644.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

