Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04487898_11579 | Not Available | Negative | 4880201 - 4881586 | 50599.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04487898_11580 | Not Available | Negative | 4881607 - 4884741 | 113310.0 |
| membrane fusion protein, multidrug efflux system | SAMN04487898_11581 | Not Available | Negative | 4884772 - 4885893 | 40172.6 |
| transcriptional regulator | SAMN04487898_11582 | Not Available | Positive | 4886244 - 4886834 | 21908.2 |
| fad dependent oxidoreductase | SAMN04487898_11583 | Not Available | Negative | 4886955 - 4889231 | 84392.4 |
| transporter, sss family | SAMN04487898_11584 | Not Available | Negative | 4889274 - 4890956 | 61083.4 |
| protein of unknown function | SAMN04487898_11585 | Not Available | Negative | 4890966 - 4891925 | 36296.4 |
| dna-binding transcriptional regulator, gntr family | SAMN04487898_11586 | Not Available | Positive | 4892347 - 4893396 | 40574.9 |
| valyl-trna synthetase | SAMN04487898_11587 | Not Available | Negative | 4893661 - 4896393 | 104516.0 |
| fecr family protein | SAMN04487898_11588 | Not Available | Positive | 4896561 - 4897679 | 42662.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

