Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | SAMN04487898_101358 | Not Available | Positive | 526146 - 527519 | 50892.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN04487898_101359 | Not Available | Negative | 527523 - 527993 | 16643.0 |
| hypothetical protein | SAMN04487898_101360 | Not Available | Negative | 528133 - 529227 | 39918.8 |
| hypothetical protein | SAMN04487898_101361 | Not Available | Positive | 529327 - 529806 | 17638.7 |
| uncharacterized membrane protein | SAMN04487898_101362 | Not Available | Negative | 529787 - 530485 | 26308.1 |
| hypothetical protein | SAMN04487898_101363 | Not Available | Negative | 530495 - 530737 | 8931.27 |
| hypothetical protein | SAMN04487898_101364 | Not Available | Positive | 530848 - 531300 | 18356.7 |
| peroxiredoxin | SAMN04487898_101365 | Not Available | Positive | 531322 - 531846 | 19817.1 |
| hypothetical protein | SAMN04487898_101366 | Not Available | Negative | 531852 - 531986 | 4999.27 |
| hypothetical protein | SAMN04487898_101367 | Not Available | Negative | 531931 - 532101 | 5960.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

