Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1835 - 1878 | 18.01 |
| hypothetical protein | SAMN04487898_1014 | Not Available | Positive | 2527 - 3360 | 32004.1 |
| hypothetical protein | SAMN04487898_1015 | Not Available | Positive | 3625 - 4785 | 41676.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04487898_1016 | Not Available | Positive | 4808 - 6499 | 63701.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_1017 | Not Available | Positive | 6519 - 9755 | 118066.0 |
| starch-binding associating with outer membrane | SAMN04487898_1018 | Not Available | Positive | 9818 - 11479 | 62261.2 |
| hypothetical protein | SAMN04487898_1019 | Not Available | Positive | 11493 - 12620 | 43224.0 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04487898_10110 | Not Available | Positive | 12623 - 16630 | 150348.0 |
| hypothetical protein | SAMN04487898_10111 | Not Available | Negative | 16620 - 17150 | 19712.0 |
| hypothetical protein | SAMN04487898_10112 | Not Available | Negative | 17211 - 17546 | 12288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

