Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11569 | Not Available | Positive | 4868950 - 4869252 | 11322.9 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04487898_11570 | Not Available | Negative | 4869462 - 4872650 | 114605.0 |
| membrane fusion protein, multidrug efflux system | SAMN04487898_11571 | Not Available | Negative | 4872673 - 4873827 | 40453.7 |
| outer membrane protein tolc | SAMN04487898_11572 | Not Available | Negative | 4873836 - 4875161 | 50118.6 |
| histidine kinase | SAMN04487898_11573 | Not Available | Positive | 4875460 - 4876551 | 42056.6 |
| two component transcriptional regulator, lyttr family | SAMN04487898_11574 | Not Available | Positive | 4876562 - 4877320 | 29054.2 |
| dna polymerase iii, delta subunit | SAMN04487898_11575 | Not Available | Negative | 4877323 - 4878348 | 39071.3 |
| uncharacterized membrane protein yckc, rdd family | SAMN04487898_11576 | Not Available | Positive | 4878386 - 4879024 | 23470.1 |
| hypothetical protein | SAMN04487898_11577 | Not Available | Positive | 4879037 - 4879435 | 14991.0 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN04487898_11578 | Not Available | Positive | 4879445 - 4879906 | 18012.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

