Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11549 | Not Available | Positive | 4848048 - 4848830 | 30541.9 |
| hypothetical protein | SAMN04487898_11550 | Not Available | Positive | 4849065 - 4849280 | 8113.99 |
| Trna-arg | Not Available | Not Available | Positive | 4850854 - 4850928 | Not Available |
| protein of unknown function | SAMN04487898_11552 | Not Available | Negative | 4850974 - 4851489 | 18378.5 |
| pas domain s-box-containing protein | SAMN04487898_11553 | Not Available | Positive | 4851625 - 4852938 | 51022.6 |
| hypothetical protein | SAMN04487898_11554 | Not Available | Positive | 4852989 - 4853750 | 28348.1 |
| tspo and mbr related proteins | SAMN04487898_11555 | Not Available | Positive | 4853747 - 4854220 | 17987.7 |
| nte family protein | SAMN04487898_11556 | Not Available | Positive | 4854239 - 4856563 | 87787.1 |
| hypothetical protein | SAMN04487898_11557 | Not Available | Positive | 4856560 - 4857090 | 19902.4 |
| outer membrane protein assembly factor bama | SAMN04487898_11558 | Not Available | Negative | 4857087 - 4859327 | 85082.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

