Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11529 | Not Available | Positive | 4825127 - 4825414 | 11119.5 |
| helix-turn-helix | SAMN04487898_11530 | Not Available | Negative | 4825512 - 4826051 | 20669.7 |
| hypothetical protein | SAMN04487898_11531 | Not Available | Positive | 4826920 - 4827261 | 13451.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_11532 | Not Available | Positive | 4827360 - 4828688 | 49536.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11533 | Not Available | Positive | 4828692 - 4831880 | 118534.0 |
| susd family protein | SAMN04487898_11534 | Not Available | Positive | 4831887 - 4833224 | 50172.9 |
| hypothetical protein | SAMN04487898_11535 | Not Available | Negative | 4833289 - 4833594 | 10749.7 |
| methylamine utilisation protein maue | SAMN04487898_11536 | Not Available | Negative | 4833740 - 4834201 | 17113.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_11537 | Not Available | Negative | 4834305 - 4834913 | 24305.7 |
| regulatory protein, luxr family | SAMN04487898_11538 | Not Available | Negative | 4834936 - 4835871 | 36286.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

