Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain iii | SAMN04487898_1159 | Not Available | Negative | 4803097 - 4804425 | 49471.9 |
| abc-2 type transport system permease protein | SAMN04487898_11510 | Not Available | Negative | 4804427 - 4806730 | 85712.0 |
| abc-2 type transport system atp-binding protein | SAMN04487898_11511 | Not Available | Negative | 4806731 - 4807669 | 34864.2 |
| susd family protein | SAMN04487898_11512 | Not Available | Negative | 4807786 - 4809174 | 52155.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11513 | Not Available | Negative | 4809196 - 4812522 | 120684.0 |
| fecr family protein | SAMN04487898_11514 | Not Available | Negative | 4812778 - 4813932 | 42568.8 |
| arac-type dna-binding protein | SAMN04487898_11515 | Not Available | Negative | 4814030 - 4814848 | 31387.9 |
| uncharacterized membrane protein | SAMN04487898_11516 | Not Available | Negative | 4814848 - 4815747 | 33201.3 |
| aldehyde dehydrogenase (nad+) | SAMN04487898_11517 | Not Available | Negative | 4815767 - 4817182 | 50701.2 |
| transcriptional regulator, badm/rrf2 family | SAMN04487898_11518 | Not Available | Negative | 4817402 - 4817839 | 15699.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

