Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 4790450 - 4790522 | Not Available |
| hypothetical protein | SAMN04487898_114182 | Not Available | Positive | 4790684 - 4791049 | 14337.3 |
| transposase | SAMN04487898_114183 | Not Available | Positive | 4791381 - 4792013 | 24659.6 |
| rna-directed dna polymerase | SAMN04487898_1152 | Not Available | Negative | 4792211 - 4793536 | 51229.6 |
| susd family protein | SAMN04487898_1153 | Not Available | Negative | 4793996 - 4795411 | 52795.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_1154 | Not Available | Negative | 4795423 - 4798764 | 121998.0 |
| fecr family protein | SAMN04487898_1155 | Not Available | Negative | 4799000 - 4800196 | 44210.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_1156 | Not Available | Negative | 4800247 - 4800846 | 23154.7 |
| protein of unknown function | SAMN04487898_1157 | Not Available | Positive | 4801083 - 4801631 | 20953.5 |
| muts domain iii | SAMN04487898_1158 | Not Available | Negative | 4801769 - 4803100 | 50073.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

