Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_114171 | Not Available | Positive | 4778144 - 4779343 | 44302.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_114172 | Not Available | Positive | 4779522 - 4783121 | 133603.0 |
| susd family protein | SAMN04487898_114173 | Not Available | Positive | 4783138 - 4784502 | 51072.6 |
| peroxiredoxin | SAMN04487898_114174 | Not Available | Positive | 4784552 - 4785559 | 36978.5 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04487898_114175 | Not Available | Negative | 4785595 - 4786134 | 20277.8 |
| transcriptional attenuator, lytr family | SAMN04487898_114176 | Not Available | Positive | 4786310 - 4787293 | 36223.8 |
| hypothetical protein | SAMN04487898_114177 | Not Available | Positive | 4787358 - 4787663 | 11442.9 |
| chaperone of endosialidase | SAMN04487898_114178 | Not Available | Positive | 4787733 - 4788167 | 16223.8 |
| starch phosphorylase | SAMN04487898_114179 | Not Available | Negative | 4788226 - 4789878 | 62553.9 |
| selenoprotein w-related protein | SAMN04487898_114180 | Not Available | Positive | 4789969 - 4790259 | 10815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

