Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN04487898_101349 | Not Available | Positive | 514106 - 514669 | 21642.7 |
| hypothetical protein | SAMN04487898_101350 | Not Available | Positive | 514650 - 514919 | 10741.8 |
| atp-dependent clp protease, protease subunit | SAMN04487898_101351 | Not Available | Positive | 515004 - 515684 | 25075.1 |
| hypothetical protein | SAMN04487898_101352 | Not Available | Negative | 515688 - 517196 | 55007.4 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 517683 - 517794 | 18.01 |
| cd2+/zn2+-exporting atpase | SAMN04487898_101353 | Not Available | Negative | 517289 - 519280 | 71822.8 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04487898_101354 | Not Available | Negative | 519316 - 519738 | 15735.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04487898_101355 | Not Available | Negative | 519760 - 521055 | 46593.1 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04487898_101356 | Not Available | Negative | 521060 - 525427 | 160053.0 |
| hypothetical protein | SAMN04487898_101357 | Not Available | Negative | 525517 - 525840 | 11968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

