Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_114131 | Not Available | Negative | 4731789 - 4732505 | 25317.2 |
| ribose 5-phosphate isomerase b | SAMN04487898_114132 | Not Available | Positive | 4732648 - 4733097 | 16071.2 |
| cytochrome c, mono-and diheme variants | SAMN04487898_114133 | Not Available | Positive | 4733105 - 4735390 | 84817.9 |
| polysaccharide lyase | SAMN04487898_114134 | Not Available | Positive | 4736076 - 4736864 | 28525.8 |
| phoh-like atpase | SAMN04487898_114135 | Not Available | Positive | 4736994 - 4738361 | 51413.8 |
| hypothetical protein | SAMN04487898_114136 | Not Available | Positive | 4738421 - 4738726 | 10815.2 |
| aminopeptidase n | SAMN04487898_114137 | Not Available | Positive | 4738795 - 4740636 | 69159.4 |
| phosphatidylglycerol lysyltransferase | SAMN04487898_114138 | Not Available | Positive | 4740996 - 4743584 | 97777.7 |
| virulence protein (virj) | SAMN04487898_114139 | Not Available | Negative | 4743586 - 4744266 | 25638.8 |
| virulence protein (virj) | SAMN04487898_114140 | Not Available | Negative | 4744263 - 4745000 | 27818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

