Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_114121 | Not Available | Positive | 4721510 - 4723195 | 63875.8 |
| protein of unknown function | SAMN04487898_114122 | Not Available | Positive | 4723355 - 4723930 | 22272.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_114123 | Not Available | Positive | 4723933 - 4724751 | 30228.0 |
| prolyl oligopeptidase | SAMN04487898_114124 | Not Available | Positive | 4724770 - 4726917 | 79396.0 |
| protein of unknown function | SAMN04487898_114125 | Not Available | Positive | 4726951 - 4727382 | 15574.9 |
| hypothetical protein | SAMN04487898_114126 | Not Available | Negative | 4727395 - 4728036 | 23784.7 |
| ahpc/tsa family protein | SAMN04487898_114127 | Not Available | Negative | 4728118 - 4728603 | 18435.2 |
| signal transduction histidine kinase | SAMN04487898_114128 | Not Available | Negative | 4728670 - 4730001 | 50377.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487898_114129 | Not Available | Negative | 4730003 - 4730677 | 25980.3 |
| hypothetical protein | SAMN04487898_114130 | Not Available | Positive | 4731130 - 4731711 | 22628.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

