Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_114100 | Not Available | Positive | 4696601 - 4698955 | 90965.6 |
| surface antigen | SAMN04487898_114101 | Not Available | Positive | 4698966 - 4701563 | 98352.7 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04487898_114102 | Not Available | Positive | 4701678 - 4702265 | 21489.8 |
| choline dehydrogenase | SAMN04487898_114103 | Not Available | Positive | 4702293 - 4703993 | 64118.2 |
| hypothetical protein | SAMN04487898_114104 | Not Available | Negative | 4704103 - 4704951 | 31761.9 |
| hypothetical protein | SAMN04487898_114105 | Not Available | Negative | 4704969 - 4705274 | 11911.6 |
| adenylyltransferase and sulfurtransferase | SAMN04487898_114106 | Not Available | Negative | 4705384 - 4706454 | 39834.9 |
| 2-iminoacetate synthase | SAMN04487898_114107 | Not Available | Negative | 4706479 - 4707591 | 42576.8 |
| thiazole synthase | SAMN04487898_114108 | Not Available | Negative | 4707597 - 4708358 | 27203.4 |
| thiamine-phosphate diphosphorylase | SAMN04487898_114109 | Not Available | Negative | 4708352 - 4708975 | 22068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

