Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11490 | Not Available | Negative | 4684773 - 4685198 | 16200.8 |
| cytochrome c oxidase accessory protein fixg | SAMN04487898_11491 | Not Available | Negative | 4685202 - 4686599 | 53232.6 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN04487898_11492 | Not Available | Negative | 4686601 - 4687398 | 29508.5 |
| hypothetical protein | SAMN04487898_11493 | Not Available | Negative | 4687395 - 4687562 | 6417.14 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN04487898_11494 | Not Available | Negative | 4687583 - 4689694 | 80046.8 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN04487898_11495 | Not Available | Negative | 4689768 - 4689953 | 7023.42 |
| cu+-exporting atpase | SAMN04487898_11496 | Not Available | Negative | 4689950 - 4692352 | 89552.4 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN04487898_11497 | Not Available | Positive | 4692568 - 4693749 | 44815.7 |
| polyphosphate kinase | SAMN04487898_11498 | Not Available | Positive | 4693757 - 4695721 | 75358.9 |
| sdia-regulated | SAMN04487898_11499 | Not Available | Positive | 4695732 - 4696601 | 33228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

