Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_11480 | Not Available | Positive | 4671518 - 4673149 | 61291.2 |
| protein of unknown function | SAMN04487898_11481 | Not Available | Positive | 4673173 - 4674849 | 59358.1 |
| glycosyl hydrolase-like 10 | SAMN04487898_11482 | Not Available | Positive | 4674912 - 4676306 | 51765.2 |
| sialate o-acetylesterase | SAMN04487898_11483 | Not Available | Positive | 4676319 - 4677761 | 53223.2 |
| hypothetical protein | SAMN04487898_11484 | Not Available | Negative | 4677864 - 4679645 | 66762.5 |
| pas domain s-box-containing protein | SAMN04487898_11485 | Not Available | Positive | 4679780 - 4680964 | 44947.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_11486 | Not Available | Positive | 4680965 - 4682023 | 40015.7 |
| d-lactate dehydrogenase | SAMN04487898_11487 | Not Available | Positive | 4682106 - 4682594 | 17758.1 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04487898_11488 | Not Available | Positive | 4682572 - 4683936 | 51910.8 |
| hypothetical protein | SAMN04487898_11489 | Not Available | Negative | 4684090 - 4684776 | 25138.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

