Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN04487898_101339 | Not Available | Positive | 495401 - 497782 | 89927.6 |
| alpha-l-fucosidase 2 | SAMN04487898_101340 | Not Available | Positive | 497799 - 500270 | 91755.2 |
| alpha-l-fucosidase 2 | SAMN04487898_101341 | Not Available | Positive | 500272 - 502869 | 96207.3 |
| alpha-d-xyloside xylohydrolase | SAMN04487898_101342 | Not Available | Positive | 502883 - 505030 | 80686.3 |
| alginate lyase | SAMN04487898_101343 | Not Available | Positive | 505040 - 506227 | 44847.1 |
| alpha-l-fucosidase | SAMN04487898_101344 | Not Available | Positive | 506215 - 508095 | 69894.3 |
| glycosyl hydrolase family 88 | SAMN04487898_101345 | Not Available | Positive | 508111 - 509418 | 48976.0 |
| alpha-l-fucosidase | SAMN04487898_101346 | Not Available | Positive | 509515 - 510954 | 53513.1 |
| right handed beta helix region | SAMN04487898_101347 | Not Available | Positive | 510962 - 512473 | 56253.6 |
| lysophospholipase l1 | SAMN04487898_101348 | Not Available | Positive | 512626 - 514041 | 52463.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

