Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_11439 | Not Available | Positive | 4618830 - 4621193 | 88713.2 |
| protein of unknown function | SAMN04487898_11440 | Not Available | Positive | 4621213 - 4622445 | 44424.8 |
| uncharacterized iron-regulated membrane protein | SAMN04487898_11441 | Not Available | Positive | 4622492 - 4623802 | 49547.5 |
| protein of unknown function | SAMN04487898_11442 | Not Available | Positive | 4623954 - 4624655 | 24837.7 |
| outer membrane cobalamin receptor protein | SAMN04487898_11443 | Not Available | Positive | 4624687 - 4627473 | 103451.0 |
| protein of unknown function | SAMN04487898_11444 | Not Available | Positive | 4627464 - 4628270 | 29681.3 |
| histidine kinase | SAMN04487898_11445 | Not Available | Positive | 4628297 - 4629367 | 40965.8 |
| two component transcriptional regulator, lyttr family | SAMN04487898_11446 | Not Available | Positive | 4629369 - 4630076 | 26768.0 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04487898_11447 | Not Available | Negative | 4630078 - 4630500 | 15656.1 |
| protein sco1/2 | SAMN04487898_11448 | Not Available | Negative | 4630504 - 4631157 | 24702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

