Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_11429 | Not Available | Positive | 4601333 - 4602448 | 41117.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11430 | Not Available | Positive | 4602636 - 4606103 | 127374.0 |
| starch-binding associating with outer membrane | SAMN04487898_11431 | Not Available | Positive | 4606115 - 4607557 | 54412.7 |
| hypothetical protein | SAMN04487898_11432 | Not Available | Positive | 4607584 - 4609206 | 56615.3 |
| predicted protein | SAMN04487898_11433 | Not Available | Positive | 4609216 - 4610169 | 34970.0 |
| hypothetical protein | SAMN04487898_11434 | Not Available | Negative | 4610091 - 4610270 | 7124.88 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11435 | Not Available | Positive | 4610467 - 4613574 | 113583.0 |
| starch-binding associating with outer membrane | SAMN04487898_11436 | Not Available | Positive | 4613583 - 4615142 | 57955.7 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04487898_11437 | Not Available | Positive | 4615205 - 4618201 | 111297.0 |
| arac-type dna-binding protein | SAMN04487898_11438 | Not Available | Negative | 4618216 - 4618713 | 18854.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

