Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor for ferrienterochelin and colicins | SAMN04487898_1148 | Not Available | Positive | 4580173 - 4582539 | 87580.1 |
| hmuy protein | SAMN04487898_1149 | Not Available | Positive | 4582552 - 4583214 | 24180.5 |
| hmuy protein | SAMN04487898_11410 | Not Available | Positive | 4583230 - 4584000 | 28065.5 |
| hypothetical protein | SAMN04487898_11411 | Not Available | Positive | 4584086 - 4584979 | 32516.3 |
| hypothetical protein | SAMN04487898_11412 | Not Available | Positive | 4584986 - 4585933 | 34802.9 |
| hmuy protein | SAMN04487898_11413 | Not Available | Positive | 4585996 - 4586700 | 25704.8 |
| heme oxygenase | SAMN04487898_11414 | Not Available | Positive | 4586724 - 4587284 | 20456.2 |
| arac-type dna-binding protein | SAMN04487898_11415 | Not Available | Positive | 4587284 - 4588279 | 38392.4 |
| protein of unknown function | SAMN04487898_11416 | Not Available | Negative | 4588287 - 4588985 | 25969.3 |
| alpha-l-fucosidase | SAMN04487898_11417 | Not Available | Positive | 4589391 - 4590902 | 56541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

