Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | SAMN04487898_113174 | Not Available | Negative | 4559473 - 4561920 | 93392.1 |
| cbs domain-containing protein | SAMN04487898_113175 | Not Available | Negative | 4562015 - 4562449 | 16342.1 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04487898_113176 | Not Available | Positive | 4562573 - 4563457 | 34344.8 |
| beta-lactamase enzyme family protein | SAMN04487898_113177 | Not Available | Negative | 4563478 - 4564689 | 46462.5 |
| vitamin b12 transporter | SAMN04487898_113179 | Not Available | Positive | 4565078 - 4566949 | 68006.3 |
| hypothetical protein | SAMN04487898_113180 | Not Available | Positive | 4567178 - 4567654 | 18047.2 |
| hypothetical protein | SAMN04487898_113181 | Not Available | Positive | 4567692 - 4567856 | 6199.62 |
| outer membrane cobalamin receptor protein | SAMN04487898_113183 | Not Available | Positive | 4568220 - 4570301 | 78959.6 |
| pqq enzyme repeat-containing protein | SAMN04487898_113184 | Not Available | Positive | 4570301 - 4571446 | 42533.0 |
| hypothetical protein | SAMN04487898_113185 | Not Available | Positive | 4571537 - 4572640 | 39968.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

