Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_113164 | Not Available | Positive | 4544492 - 4546690 | 82991.1 |
| hypothetical protein | SAMN04487898_113165 | Not Available | Positive | 4546718 - 4547353 | 23190.2 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04487898_113166 | Not Available | Positive | 4547366 - 4550197 | 104073.0 |
| protein of unknown function | SAMN04487898_113167 | Not Available | Positive | 4550204 - 4551466 | 45963.3 |
| hypothetical protein | SAMN04487898_113168 | Not Available | Positive | 4551494 - 4553059 | 59015.2 |
| dethiobiotin synthetase | SAMN04487898_113169 | Not Available | Negative | 4553124 - 4553732 | 22019.8 |
| 8-amino-7-oxononanoate synthase | SAMN04487898_113170 | Not Available | Negative | 4553725 - 4554855 | 41228.3 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487898_113171 | Not Available | Negative | 4554964 - 4555740 | 29418.1 |
| putative endonuclease | SAMN04487898_113172 | Not Available | Positive | 4555875 - 4556225 | 13713.7 |
| component of the tol biopolymer transport system | SAMN04487898_113173 | Not Available | Negative | 4556294 - 4559476 | 119451.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

